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Genome-wide association studies (GWAS) increase their popularity among medical, biological, and social sciences to identify the association between single nucleotide polymorphisms and phenotypic traits. This tutorial aims to provide a guidelines for conducing genome wide analysis in Tassel.
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Structure Software is a freely available software package that one may use for rigorous investigation of admixed individuals; identification of point of hybridization and migrants; and estimate over all structure of a population using a commonly used genetic markers such as SNPs and SSRs. This software was developed by Pritchard Lab at Stanford University and can downloaded at this link.
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MapChart is a free software to plot publishing quality genetic linkage maps as well as QTLs. This software was developed at Wageningen University by Roeland E. Voorrips and can be downloaded at this link .
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There exist some definite gaps “from performing of an experiment to the formulation of a hypothesis”. It is not necessary that a person good at lab work must be an expert in scientific writing too.
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GitHub Pages runs in safe mode and only allows a set of whitelisted plugins. To use the gem in GitHub Pages, one of the workarounds is to use CI (e.g. travis, github workflow) and deploy to your gh-pages branch like: jekyll-deploy-action, and I use this plugin: jekyll-spaceship in my github pages.